Updated by FastRunner on Sunday, December 22nd 2002.
Ghemical is a molecular modelling software package with a GUI (one for the GLUT library and another for GNOME) and some nice 3D-visualization tools. It can do all-atoms molecular mechanics and dynamics, athough the current parameter set is still experimental. It can also be used as a graphical front-end for the quantum chemistry program MPQC. Ghemical is written in C++, and hopefully offers a good framework for a generic freeware molecular modelling tool.